TY - JOUR
T1 - Comparison of quantitative parameters and radiomic features as inputs into machine learning models to predict the Gleason score of prostate cancer lesions
AU - Nai, Ying Hwey
AU - Cheong, Dennis Lai Hong
AU - Roy, Sharmili
AU - Kok, Trina
AU - Stephenson, Mary C.
AU - Schaefferkoetter, Josh
AU - Totman, John J.
AU - Conti, Maurizio
AU - Eriksson, Lars
AU - Robins, Edward G.
AU - Wang, Ziting
AU - Chua, Wynne Yuru
AU - Ang, Bertrand Wei Leng
AU - Singha, Arvind Kumar
AU - Thamboo, Thomas Paulraj
AU - Chiong, Edmund
AU - Reilhac, Anthonin
N1 - Funding Information:
This study was funded by the National University Cancer Institute, Singapore (NCIS) Centre Grant Seed Funding Program ( NMRC/NR14NMR060 ) for the clinical study.
Publisher Copyright:
© 2023 Elsevier Inc.
PY - 2023/7
Y1 - 2023/7
N2 - Introduction: The classification of prostate cancer (PCa) lesions using Prostate Imaging Reporting and Data System (PI-RADS) suffers from poor inter-reader agreement. This study compared quantitative parameters or radiomic features from multiparametric magnetic resonance imaging (mpMRI) or positron emission tomography (PET), as inputs into machine learning (ML) to predict the Gleason scores (GS) of detected lesions for improved PCa lesion classification. Methods: 20 biopsy-confirmed PCa subjects underwent imaging before radical prostatectomy. A pathologist assigned GS from tumour tissue. Two radiologists and one nuclear medicine physician delineated the lesions on the mpMR and PET images, yielding 45 lesion inputs. Seven quantitative parameters were extracted from the lesions, namely T2-weighted (T2w) image intensity, apparent diffusion coefficient (ADC), transfer constant (KTRANS), efflux rate constant (Kep), and extracellular volume ratio (Ve) from mpMR images, and SUVmean and SUVmax from PET images. Eight radiomic features were selected out of 109 radiomic features from T2w, ADC and PET images. Quantitative parameters or radiomic features, with risk factors of age, prostate-specific antigen (PSA), PSA density and volume, of 45 different lesion inputs were input in different combinations into four ML models - Decision Tree (DT), Support Vector Machine (SVM), k-Nearest-Neighbour (kNN), Ensembles model (EM). Results: SUVmax yielded the highest accuracy in discriminating detected lesions. Among the 4 ML models, kNN yielded the highest accuracies of 0.929 using either quantitative parameters or radiomic features with risk factors as input. Conclusions: ML models' performance is dependent on the input combinations and risk factors further improve ML classification accuracy.
AB - Introduction: The classification of prostate cancer (PCa) lesions using Prostate Imaging Reporting and Data System (PI-RADS) suffers from poor inter-reader agreement. This study compared quantitative parameters or radiomic features from multiparametric magnetic resonance imaging (mpMRI) or positron emission tomography (PET), as inputs into machine learning (ML) to predict the Gleason scores (GS) of detected lesions for improved PCa lesion classification. Methods: 20 biopsy-confirmed PCa subjects underwent imaging before radical prostatectomy. A pathologist assigned GS from tumour tissue. Two radiologists and one nuclear medicine physician delineated the lesions on the mpMR and PET images, yielding 45 lesion inputs. Seven quantitative parameters were extracted from the lesions, namely T2-weighted (T2w) image intensity, apparent diffusion coefficient (ADC), transfer constant (KTRANS), efflux rate constant (Kep), and extracellular volume ratio (Ve) from mpMR images, and SUVmean and SUVmax from PET images. Eight radiomic features were selected out of 109 radiomic features from T2w, ADC and PET images. Quantitative parameters or radiomic features, with risk factors of age, prostate-specific antigen (PSA), PSA density and volume, of 45 different lesion inputs were input in different combinations into four ML models - Decision Tree (DT), Support Vector Machine (SVM), k-Nearest-Neighbour (kNN), Ensembles model (EM). Results: SUVmax yielded the highest accuracy in discriminating detected lesions. Among the 4 ML models, kNN yielded the highest accuracies of 0.929 using either quantitative parameters or radiomic features with risk factors as input. Conclusions: ML models' performance is dependent on the input combinations and risk factors further improve ML classification accuracy.
KW - Gleason score (GS)
KW - Machine learning (ML)
KW - Multiparametric magnetic resonance imaging (mpMRI)
KW - Positron emission tomography (PET)
KW - Quantitative parameters
KW - Radiomics
UR - http://www.scopus.com/inward/record.url?scp=85150862923&partnerID=8YFLogxK
U2 - 10.1016/j.mri.2023.03.009
DO - 10.1016/j.mri.2023.03.009
M3 - Article
C2 - 36933775
AN - SCOPUS:85150862923
SN - 0730-725X
VL - 100
SP - 64
EP - 72
JO - Magnetic Resonance Imaging
JF - Magnetic Resonance Imaging
ER -